| Date | Ship | Location | Remarks |
| March 15, 2005 | USS Seattle (AOE 3) | Norfolk, Va. | |
| May 27, 2005 | USS LaSalle (AGF 3) | Norfolk, Va. | |
| June 29, 2005 | USS Vincennes (CG 49) | San Diego, Calif. | |
| July 2005 | USNS Sirius (T-AFS 8) | | transfer to Texas A&M as the USTS Texas Clipper III |
| August 19, 2005 | USS O'Bannon (DD 987) | Mayport, Fla. | |
| September 22, 2005 | USS Cushing (DD 985) | San Diego, Calif. | |
| September 28, 2005 | USS Duluth (LPD 6) | San Diego, Calif. | |
| October 1, 2005 | USS Camden (AOE 2) | Bremerton, Wash. | |
| October 28, 2005 | USS Belleau Wood (LHA 3) | San Diego, Calif. | |
| December 16, 2005 | USS Thomas S. Gates (CG 51) | Mayport, Fla. | |
| January 19, 2006 | USS Grasp (ARS 51) | Little Creek, Va. | transfer to MSC |
| June 15, 2006 | USS Osprey (MHC 51) | Ingleside, Tx. | |
| June 15, 2006 | USS Robin (MHC 54) | Ingleside, Tx. | |
| June 30, 2006 | USS Oriole (MHC 55) | Ingleside, Tx. | |
| June 30, 2006 | USS Falcon (MHC 59) | Ingleside, Tx. | |
| July 13, 2006 | USS Grapple (ARS 53) | Little Creek, Va. | transfer to MSC |
| September 27, 2006 | USS Austin (LPD 4) | Norfolk, Va. | |
| September 30, 2006 | USS Coronado (AGF 11) | | |
| November 3, 2006 | USS Salt Lake City (SSN 716) | Bremerton, Wash | |
| November 30, 2006 | USNS Joshua Humphreys (T-AO 188) | | |
| December 14, 2006 | USS Dolphin (AGSS 555) | San Diego, Calif. | |
| January 7, 2007 | USS Cardinal (MHC 60) | Ingleside, Tx. | transfer to Egyptian Navy |
| January 7, 2007 | USS Raven (MHC 61) | Ingleside, Tx. | transfer to Egyptian Navy |
| January 12, 2007 | USS Salvor (ARS 52) | Pearl Harbor, Hi. | transfer to MSC |
| January 17, 2007 | USS Trenton (LPD 14) | Norfolk, Va. | |
| January 22, 2007 | USS Ogden (LPD 5) | San Diego, Calif | |
| March 1, 2007 | USS Hyman G. Rickover (SSN 709) | Portsmouth, Va. | |
| March 16, 2007 | USS Heron (MHC 52) | Ingleside, Tx. | transfer to Hellenic Navy |
| March 16, 2007 | USS Pelican (MHC 53) | Ingleside, Tx. | transfer to Hellenic Navy |
| March 23, 2007 | USS John F. Kennedy (CV 67) | Mayport, Fla. | |
| April 25, 2007 | USS Saipan (LHA 2) | Norfolk, Va. | |
| September 26, 2007 | USS Safeguard (ARS 50) | Sasebo, Japan | transfer to MSC |
| September 27, 2007 | USS Minneapolis - St. Paul (SSN 708) | | |
| September 28, 2007 | USS Shreveport (LPD 12) | Norfolk, Va. | |
| September 30, 2007 | USS Honolulu (SSN 718) | Bremerton, Wash. | |
| December 1, 2007 | USS Kingfisher (MHC 56) | Ingleside, Tx. | |
| December 1, 2007 | USS Cormorant (MHC 57) | Ingleside, Tx. | |
| December 1, 2007 | USS Black Hawk (MHC 58) | Ingleside, Tx. | |
| December 1, 2007 | USS Shrike (MHC 62) | Ingleside, Tx. | |
| January 25, 2008 | USNS Spica (T-AFS 9) | | |
| 2008 | USNS Hayes (T-AG 195) | | |
| January 31, 2009 | USS Kitty Hawk (CV 63) | Bremerton, Wash. | |
| March 31, 2009 | USS Tarawa (LHA 1) | San Diego, Calif. | |
| September 30, 2009 | USS Nashville (LPD 13) | Norfolk, Va. | |
| Date | Ship | Location | Remarks |
| February 16, 2004 | USS Peterson (DD 969) | US East Coast | DD 21 Program Weapons Effects Test |
| April 13, 2004 | USS John Young (DD 973) | Hawaii | |
| July 14, 2004 | USS Kinkaid (DD 965) | Hawaii | RIMPAC 2004 |
| July 15, 2004 | USS Harry W. Hill (DD 986) | Hawaii | RIMPAC 2004 |
| July 30, 2004 | USS Nicholson (DD 982) | US East Coast | |
| November 13, 2004 | USS Hayler (DD 997) | US East Coast | |
| November 23, 2004 | USS Schenectady (LST 1185) | Hawaii | |
| April 2005 | USS America (CV 66) | US East Coast | |
| May 19, 2005 | USS Guadalcanal (LPH 7) | Virginia Capes | |
| June 16, 2005 | USS Mount Vernon (LSD 39) | Pacific | |
| June 23, 2005 | USS William H. Standley (CG 32) | Coral Sea | Exercise Talisman Sabre 2005 |
| August 22, 2005 | USS Oldendorf (DD 972) | Hawaii | |
| August 23, 2005 | USS Fife (DD 991) | Hawaii | |
| August 25, 2005 | USS Briscoe (DD 977) | off Cherry Point | |
| February 9, 2006 | USS O'Brien (DD 975) | Hawaii | |
| May 17, 2006 | USS Oriskany (CV 34) | off Pensacola, Fla. | artificial reef and diving location |
| June 29, 2006 | USNS Butte (T-AE 27) | US East Coast | |
| July 12, 2006 | USS Mauna Kea (AE 22) | Hawaii | RIMPAC 2006 |
| July 13, 2006 | USS Belleau Wood (LHA 3) | Hawaii | RIMPAC 2006 |
| July 15, 2006 | USNS Mars (T-AFS 1) | Hawaii | RIMPAC 2006 |
| July 22, 2006 | USS Thorn (DD 988) | US East Coast | |
| November 2, 2006 | USS Valley Forge (CG 50) | Hawaii | |
| December 8, 2006 | USS Spruance (DD 963) | US East Coast | |
| August 7, 2007 | USS Knox (FF 1052) | Guam | Exercise Valiant Shield 2007 |
| August 10, 2007 | USS Jouett (CG 29) | Guam | Exercise Valiant Shield 2007 |
| July 11, 2008 | USS David R. Ray (DD 971) | Hawaii | RIMPAC 2008 |
| July 14, 2008 | USS Horne (CG 30) | Hawaii | RIMPAC 2008 |
| July 16, 2008 | USS Fletcher (DD 992) | Hawaii | RIMPAC 2008 |
| July 2008 | USS Cushing (DD 985) | Hawaii | RIMPAC 2008 |
| FY2009 | USS Acadia (AD 42) | | |
| FY2009 | USS Conolly (DD 979) | | |
| FY2009 | USNS Hayes (T-AG 195) | | |
| FY2010 | USNS Spica (T-AFS 9) | | |
| FY2010 | USNS Niagara Falls (T-AFS 3) | | |
| FY2010 | USNS San Jose (T-AFS 7) | | |
| FY2010 | USNS Concord (T-AFS 5) | | |
| FY2011 | USNS Saturn (T-AFS 10) | | |
| FY2011 | USNS Kilauea (T-AE 26) | | |
| FY2012 | USNS Flint (T-AE 32) | | |
| FY2012 | USNS Shasta (T-AE 33) | | |
| FY2012 | USNS Mount Baker (T-AE 34) | | |
| FY2012 | USNS Kiska (T-AE 35) | | |
| TBA | USS Arthur W. Radford (DD 968) | | slated to sink and become artificial reefs |
| TBA | USS Forrestal (CV 59) | | slated to sink and become artificial reefs |